One battery should be acting as your starting battery. The other should be acting as the 'House' battery. You should have enough Cold Cranking Amps (CCA) to start the engine easily on just your starting battery. Once you shut down the engine and don't have access to shore power (Anchoring or swing mooring) then you should switch to battery 2 to run the house systems (fridge, lights, head, pressure water pump, radio, anchor light, etc). When ready to leave, switch back to battery 2.
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