SB,
The CO detector shouldnt draw enough current when the engines are off to kill the battery(s), unless the boat sits unused for weeks. I wouldn't worry about that.
The amp, however, will definately draw down the battery if it isn't wired in such a way that it turns itself off when the head unit/radio is turned off. Sounds to me like it's wired wrong. The head unit will have a wire, yellow I think, that is connected to the amp. The amp can be wired to a hot source. When the radio is turned on it sends a voltage down the yellow, the amp sees that voltage and turns itself on. When the HU is turned off the voltage on the yellow stops and the amp turns itself off. I think.
As far as the radio itself goes, closely inspect the connector blocks on the rear of the face and the front of the unit. They have to make contact with each other so be sure all are clean and straight.
If your boat doesn't sit in the water install a battery switch so you can kill all the power to the boat.
Dan
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